PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy007862
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TCP
Protein Properties Length: 256aa    MW: 26877.3 Da    PI: 10.4738
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59546407PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP90.14.7e-2829019105
        TCP  19 dRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.kaaksaakskksqksaa 105
                +RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++  +++ +  + ++ sg + ++ +++ kk++k++a
  Ahy007862   2 GRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsVNGTLKIPTTKPLSGsDPEPGDPPCKKKRKRPA 90 
                8**********************************************888885543222222222211111233444443333333332 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136922.751145IPR017887Transcription factor TCP subgroup
PfamPF036344.0E-23289IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
XGRRIRMPAT CAARIFQLTR ELGHKSDGET IRWLLEHAEP AIIAATGTGT VPAIAMSVNG  60
TLKIPTTKPL SGSDPEPGDP PCKKKRKRPA NSAYVDVNES AVSVSAGLTV TTNSVTNTLT  120
NSTTSSATHI TNSVTAAIIP QQTAIALPQN AVPAMWTAIP SNAFFVVPSV AAAGPSNAPQ  180
FFTFARPISA FVSSVMTPVQ IQPAGSTTAP SSKSPPRATV MAPSSATTTT HTLRDFSLEI  240
YDKQELQFMS KSSSKH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015950890.11e-166PREDICTED: transcription factor TCP9-like
SwissprotO646476e-67TCP9_ARATH; Transcription factor TCP9
TrEMBLA0A0L9VRK81e-108A0A0L9VRK8_PHAAN; Uncharacterized protein
STRINGGLYMA03G02090.11e-104(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.13e-63TCP family protein